Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_12695 | Not Available | Positive | 2744607 - 2747111 | 93169.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BK658_12700 | Not Available | Negative | 2747196 - 2748647 | 53998.7 |
| alginate o-acetyltransferase | BK658_12705 | Not Available | Negative | 2748957 - 2749610 | 22794.2 |
| alginate o-acetyltransferase | BK658_12710 | Not Available | Negative | 2749625 - 2750800 | 43684.0 |
| membrane-bound o-acyltransferase family protein | BK658_12715 | Not Available | Negative | 2750812 - 2752368 | 58560.6 |
| poly(beta-d-mannuronate) lyase | BK658_12720 | Not Available | Negative | 2752566 - 2753690 | 41996.7 |
| alginate o-acetyltransferase | BK658_12725 | Not Available | Negative | 2753699 - 2755147 | 53534.3 |
| poly(beta-d-mannuronate) c5 epimerase | BK658_12730 | Not Available | Negative | 2755159 - 2756778 | 59531.0 |
| transcriptional regulator | BK658_12735 | Not Available | Negative | 2756778 - 2758262 | 54523.1 |
| alginate biosynthesis protein | BK658_12740 | Not Available | Negative | 2758259 - 2759638 | 50202.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
