Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_12645 | Not Available | Negative | 2733920 - 2734888 | 35032.1 |
| rnd transporter | BK658_12650 | Not Available | Positive | 2735188 - 2736699 | 53874.9 |
| fusc family protein | BK658_12655 | Not Available | Positive | 2736839 - 2739025 | 80328.8 |
| duf1656 domain-containing protein | BK658_12660 | Not Available | Positive | 2739015 - 2739215 | 7637.58 |
| efflux transporter periplasmic adaptor subunit | BK658_12665 | Not Available | Positive | 2739226 - 2740089 | 32283.7 |
| hypothetical protein | BK658_12670 | Not Available | Negative | 2740321 - 2740695 | 13400.8 |
| duf4440 domain-containing protein | BK658_12675 | Not Available | Negative | 2741016 - 2741414 | 14622.2 |
| hypothetical protein | BK658_12680 | Not Available | Negative | 2741598 - 2742869 | 45099.9 |
| short-chain dehydrogenase | BK658_12685 | Not Available | Negative | 2743110 - 2743934 | 28680.1 |
| multidrug transporter | BK658_12690 | Not Available | Negative | 2743974 - 2744438 | 17290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
