Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | BK658_12595 | Not Available | Positive | 2722401 - 2722973 | 21451.8 |
| sugar abc transporter substrate-binding protein | BK658_12600 | Not Available | Positive | 2722970 - 2723959 | 35936.6 |
| bifunctional metallophosphatase/5'-nucleotidase | BK658_12605 | Not Available | Positive | 2724122 - 2725822 | 60718.0 |
| tonb-dependent receptor | BK658_12610 | Not Available | Positive | 2726063 - 2728504 | 88624.5 |
| hypothetical protein | BK658_12615 | Not Available | Positive | 2728504 - 2729556 | 38360.0 |
| arac family transcriptional regulator | BK658_12620 | Not Available | Negative | 2729578 - 2730453 | 32693.0 |
| eama family transporter | BK658_12625 | Not Available | Positive | 2730593 - 2731495 | 32329.0 |
| hypothetical protein | BK658_12630 | Not Available | Negative | 2731544 - 2732053 | 19465.0 |
| hypothetical protein | BK658_12635 | Not Available | Positive | 2732302 - 2732694 | 14494.1 |
| bifunctional glyoxylate/hydroxypyruvate reductase b | BK658_12640 | Not Available | Negative | 2732755 - 2733729 | 35357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
