Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pressure-regulated protein | BK658_12495 | Not Available | Negative | 2706213 - 2706521 | 11451.3 |
| peptidylprolyl isomerase | BK658_12500 | Not Available | Positive | 2706520 - 2707005 | 17014.8 |
| glutathione peroxidase | BK658_12505 | Not Available | Positive | 2707130 - 2707612 | 17582.1 |
| 12-oxophytodienoate reductase | BK658_12510 | Not Available | Positive | 2707801 - 2708904 | 40332.9 |
| glycoside hydrolase | BK658_12515 | Not Available | Negative | 2708873 - 2710108 | 45842.1 |
| n-acetyl-beta-hexosaminidase | BK658_12520 | Not Available | Negative | 2710192 - 2711769 | 58292.4 |
| sulfate transporter cysz | BK658_12525 | Not Available | Negative | 2712067 - 2712822 | 28255.7 |
| thioredoxin-disulfide reductase | BK658_12530 | Not Available | Positive | 2713138 - 2714100 | 34048.4 |
| hopj type iii effector protein | BK658_12535 | Not Available | Negative | 2714333 - 2714671 | 11846.8 |
| cell division protein dedd | BK658_12540 | Not Available | Negative | 2714664 - 2714960 | 11270.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
