Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | BK658_12445 | Not Available | Positive | 2692357 - 2693700 | 48010.2 |
| histidinol-phosphate transaminase | BK658_12450 | Not Available | Positive | 2693697 - 2694749 | 38570.1 |
| nickel abc transporter substrate-binding protein | BK658_12455 | Not Available | Negative | 2694882 - 2695610 | 26152.6 |
| tonb-dependent receptor | BK658_12460 | Not Available | Negative | 2695623 - 2697728 | 77248.4 |
| 2-alkenal reductase | BK658_12465 | Not Available | Negative | 2697870 - 2699024 | 40843.5 |
| nif3-like dinuclear metal center hexameric protein | BK658_12470 | Not Available | Positive | 2699127 - 2699885 | 27621.2 |
| sulfate adenylyltransferase small subunit | BK658_12475 | Not Available | Positive | 2700136 - 2701053 | 35191.2 |
| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase | BK658_12480 | Not Available | Positive | 2701063 - 2702961 | 69030.5 |
| acyltransferase | BK658_12485 | Not Available | Negative | 2703145 - 2704053 | 35093.8 |
| phosphate acetyltransferase | BK658_12490 | Not Available | Negative | 2704054 - 2706153 | 75254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
