Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_12345 | Not Available | Negative | 2677220 - 2677744 | 20063.0 |
| metalloprotease pmba | BK658_12350 | Not Available | Positive | 2677853 - 2679199 | 47962.8 |
| phosphocarrier protein hpr | BK658_12355 | Not Available | Negative | 2679433 - 2679711 | 9913.1 |
| rnase adaptor protein rapz | BK658_12360 | Not Available | Negative | 2679727 - 2680584 | 32058.4 |
| pts iia-like nitrogen-regulatory protein ptsn | BK658_12365 | Not Available | Negative | 2680587 - 2681051 | 16745.4 |
| ribosomal subunit interface protein | BK658_12370 | Not Available | Negative | 2681064 - 2681372 | 11555.0 |
| rna polymerase factor sigma-54 | BK658_12375 | Not Available | Negative | 2681482 - 2682975 | 56671.1 |
| lps export abc transporter atp-binding protein | BK658_12380 | Not Available | Negative | 2683157 - 2683882 | 26525.2 |
| lipopolysaccharide transport periplasmic protein lpta | BK658_12385 | Not Available | Negative | 2683882 - 2684427 | 19455.4 |
| lps export abc transporter periplasmic protein lptc | BK658_12390 | Not Available | Negative | 2684414 - 2684986 | 21352.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
