Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | BK658_12245 | Not Available | Negative | 2651891 - 2653510 | 58916.1 |
| 5-dehydro-4-deoxyglucarate dehydratase | BK658_12250 | Not Available | Positive | 2653747 - 2654658 | 32715.4 |
| aldehyde dehydrogenase family protein | BK658_12255 | Not Available | Positive | 2654733 - 2656178 | 51068.0 |
| mfs transporter | BK658_12260 | Not Available | Positive | 2656282 - 2657643 | 49255.8 |
| galactarate dehydratase | BK658_12265 | Not Available | Positive | 2657655 - 2659208 | 56455.5 |
| malate transporter | BK658_12270 | Not Available | Positive | 2659388 - 2660329 | 33385.7 |
| 4-carboxymuconolactone decarboxylase | BK658_12275 | Not Available | Negative | 2660468 - 2660860 | 14320.1 |
| conjugal transfer protein trar | BK658_12280 | Not Available | Negative | 2660857 - 2661927 | 37853.8 |
| hypothetical protein | BK658_12285 | Not Available | Negative | 2661978 - 2662352 | 13410.1 |
| aspartyl/glutamyl-trna amidotransferase subunit b | BK658_12290 | Not Available | Negative | 2662500 - 2663945 | 52933.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
