Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | BK658_12195 | Not Available | Negative | 2639490 - 2641091 | 59544.8 |
| abc transporter substrate-binding protein | BK658_12200 | Not Available | Negative | 2641392 - 2643017 | 60293.9 |
| abc transporter substrate-binding protein | BK658_12205 | Not Available | Negative | 2643276 - 2644877 | 59326.2 |
| hypothetical protein | BK658_12210 | Not Available | Positive | 2645437 - 2645823 | 14086.7 |
| hypothetical protein | BK658_12215 | Not Available | Negative | 2645959 - 2646675 | 25650.9 |
| histidine kinase | BK658_12220 | Not Available | Positive | 2646950 - 2648212 | 46868.2 |
| two-component system response regulator | BK658_12225 | Not Available | Positive | 2648205 - 2648765 | 20615.8 |
| abc transporter atp-binding protein | BK658_12230 | Not Available | Positive | 2648862 - 2650589 | 65801.9 |
| gntr family transcriptional regulator | BK658_12235 | Not Available | Positive | 2650795 - 2651544 | 27667.9 |
| hypothetical protein | BK658_12240 | Not Available | Negative | 2651685 - 2651876 | 6413.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
