Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/betaine abc transporter substrate-binding protein | BK658_12145 | Not Available | Negative | 2627906 - 2628799 | 33079.5 |
| glycine/betaine abc transporter permease | BK658_12150 | Not Available | Negative | 2628824 - 2629540 | 24894.6 |
| peptide chain release factor 3 | BK658_12155 | Not Available | Positive | 2629995 - 2631578 | 59680.5 |
| hypothetical protein | BK658_12160 | Not Available | Positive | 2631925 - 2632155 | 7780.94 |
| dipeptide abc transporter atp-binding protein | BK658_12165 | Not Available | Negative | 2632276 - 2633247 | 35823.6 |
| dipeptide abc transporter atp-binding protein dppd | BK658_12170 | Not Available | Negative | 2633247 - 2634215 | 34993.8 |
| dipeptide abc transporter permease dppc | BK658_12175 | Not Available | Negative | 2634226 - 2635137 | 32481.8 |
| peptide abc transporter permease | BK658_12180 | Not Available | Negative | 2635148 - 2636158 | 36951.3 |
| abc transporter substrate-binding protein | BK658_12185 | Not Available | Negative | 2636233 - 2637828 | 58891.9 |
| porin | BK658_12190 | Not Available | Negative | 2637907 - 2639319 | 51341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
