Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_12095 | Not Available | Negative | 2618222 - 2618560 | 12579.2 |
| cytochrome b | BK658_12100 | Not Available | Positive | 2619008 - 2620471 | 52999.9 |
| cytochrome c oxidase subunit i | BK658_12105 | Not Available | Positive | 2620514 - 2622289 | 65803.5 |
| cytochrome c oxidase subunit iii | BK658_12110 | Not Available | Positive | 2622286 - 2622978 | 25562.2 |
| bb3-type cytochrome oxidase subunit iv | BK658_12115 | Not Available | Positive | 2622985 - 2623698 | 26332.1 |
| cytochrome c oxidase subunit iv | BK658_12120 | Not Available | Positive | 2623732 - 2624049 | 12111.5 |
| nad/fad-utilizing enzyme apparently involved in cell division | BK658_12125 | Not Available | Negative | 2624095 - 2624655 | 20984.9 |
| short-chain dehydrogenase | BK658_12130 | Not Available | Negative | 2624971 - 2625240 | 9804.81 |
| glycine/betaine abc transporter atp-binding protein | BK658_12135 | Not Available | Negative | 2625824 - 2626981 | 43118.1 |
| choline abc transporter permease | BK658_12140 | Not Available | Negative | 2627204 - 2627896 | 24207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
