Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | BK658_12045 | Not Available | Positive | 2608928 - 2610271 | 50009.9 |
| duf305 domain-containing protein | BK658_12050 | Not Available | Positive | 2610402 - 2610926 | 18822.3 |
| hypothetical protein | BK658_12055 | Not Available | Negative | 2610999 - 2611538 | 19369.7 |
| inclusion body protein | BK658_12060 | Not Available | Negative | 2611661 - 2612164 | 18430.8 |
| hypothetical protein | BK658_12065 | Not Available | Negative | 2612480 - 2612662 | 6422.01 |
| hypothetical protein | BK658_12070 | Not Available | Negative | 2612677 - 2613873 | 43383.1 |
| hypothetical protein | BK658_12075 | Not Available | Negative | 2613895 - 2615430 | 56415.9 |
| hypothetical protein | BK658_12080 | Not Available | Positive | 2615737 - 2616066 | 12774.1 |
| trans-aconitate 2-methyltransferase | BK658_12085 | Not Available | Positive | 2616471 - 2617241 | 28248.7 |
| hypothetical protein | BK658_12090 | Not Available | Negative | 2617277 - 2617684 | 14557.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
