Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | BK658_11845 | Not Available | Negative | 2566755 - 2568017 | 46113.0 |
| nitrile hydratase | BK658_11850 | Not Available | Positive | 2568636 - 2568893 | 8772.33 |
| gnat family n-acetyltransferase | BK658_11855 | Not Available | Positive | 2569007 - 2569483 | 17803.2 |
| hexxh motif domain-containing protein | BK658_11860 | Not Available | Positive | 2569498 - 2570658 | 44139.1 |
| dehydrogenase | BK658_11865 | Not Available | Positive | 2570675 - 2572642 | 73540.5 |
| hypothetical protein | BK658_11870 | Not Available | Positive | 2573207 - 2573581 | 13438.9 |
| multidrug transporter | BK658_11875 | Not Available | Negative | 2574706 - 2576166 | 52760.1 |
| multidrug efflux rnd transporter permease | BK658_11880 | Not Available | Negative | 2576163 - 2579327 | 113297.0 |
| efflux transporter periplasmic adaptor subunit | BK658_11885 | Not Available | Negative | 2579331 - 2580488 | 41017.9 |
| tetr family transcriptional regulator | BK658_11890 | Not Available | Positive | 2580754 - 2581386 | 24002.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
