Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2063 domain-containing protein | BK658_11695 | Not Available | Negative | 2531567 - 2532340 | 27819.7 |
| hypothetical protein | BK658_11700 | Not Available | Negative | 2532337 - 2533230 | 33201.7 |
| hypothetical protein | BK658_11705 | Not Available | Negative | 2533253 - 2533561 | 10177.2 |
| abc transporter atp-binding protein | BK658_11710 | Not Available | Negative | 2533797 - 2534498 | 25518.1 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | BK658_11715 | Not Available | Negative | 2534499 - 2535266 | 28247.5 |
| high-affinity branched-chain amino acid abc transporter permease livm | BK658_11720 | Not Available | Negative | 2535263 - 2536519 | 45587.7 |
| branched-chain amino acid abc transporter permease livh | BK658_11725 | Not Available | Negative | 2536516 - 2537439 | 32510.9 |
| leucine abc transporter subunit substrate-binding protein livk | BK658_11730 | Not Available | Negative | 2537671 - 2538798 | 39678.4 |
| hypothetical protein | BK658_11735 | Not Available | Positive | 2539146 - 2539451 | 11182.3 |
| hypothetical protein | BK658_11740 | Not Available | Negative | 2539768 - 2541945 | 82098.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
