Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_11595 | Not Available | Positive | 2510958 - 2511236 | 10384.2 |
| collagen pro alpha-chain precursor | BK658_11600 | Not Available | Positive | 2511229 - 2511987 | 25194.1 |
| hypothetical protein | BK658_11605 | Not Available | Negative | 2512118 - 2512582 | 17152.1 |
| atp-dependent dna helicase ding | BK658_11610 | Not Available | Positive | 2512682 - 2514826 | 78848.2 |
| beta-agarase | BK658_11615 | Not Available | Positive | 2514921 - 2517308 | 86566.5 |
| esta family serine hydrolase | BK658_11620 | Not Available | Positive | 2517477 - 2518622 | 41293.3 |
| hypothetical protein | BK658_11625 | Not Available | Positive | 2518766 - 2519800 | 36001.0 |
| pyridoxamine 5'-phosphate oxidase | BK658_11630 | Not Available | Positive | 2519841 - 2520488 | 24667.0 |
| 30s ribosomal protein s3 | BK658_11635 | Not Available | Negative | 2520492 - 2520728 | 9114.17 |
| hypothetical protein | BK658_11640 | Not Available | Positive | 2520897 - 2521361 | 15779.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
