Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase | BK658_11545 | Not Available | Negative | 2501986 - 2503104 | 40743.8 |
| amino acid abc transporter permease | BK658_11550 | Not Available | Negative | 2503132 - 2503842 | 26619.8 |
| amino acid abc transporter permease | BK658_11555 | Not Available | Negative | 2503839 - 2504567 | 26808.7 |
| abc transporter substrate-binding protein | BK658_11560 | Not Available | Negative | 2504626 - 2505405 | 27593.1 |
| penicillin acylase family protein | BK658_11565 | Not Available | Negative | 2505647 - 2508097 | 89431.2 |
| cysteine hydrolase | BK658_11570 | Not Available | Positive | 2508306 - 2508863 | 20587.3 |
| zinc chelation protein secc | BK658_11575 | Not Available | Negative | 2508980 - 2509189 | 7704.77 |
| hypothetical protein | BK658_11580 | Not Available | Negative | 2509195 - 2509680 | 18727.8 |
| hypothetical protein | BK658_11585 | Not Available | Negative | 2509726 - 2510202 | 17260.2 |
| hypothetical protein | BK658_11590 | Not Available | Negative | 2510207 - 2510704 | 18459.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
