Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 2493152 - 2493228 | Not Available |
| dna polymerase iv | BK658_11500 | Not Available | Positive | 2493528 - 2494589 | 39443.2 |
| hypothetical protein | BK658_11505 | Not Available | Negative | 2494680 - 2495633 | 35673.1 |
| proline--trna ligase | BK658_11510 | Not Available | Negative | 2495651 - 2497366 | 63255.8 |
| ampg family muropeptide mfs transporter | BK658_11515 | Not Available | Negative | 2497492 - 2499054 | 56677.6 |
| dna base-flipping protein ybaz | BK658_11520 | Not Available | Negative | 2499098 - 2499451 | 12873.4 |
| cold-shock protein | BK658_11525 | Not Available | Negative | 2499609 - 2499818 | 7727.11 |
| dctp deaminase | BK658_11530 | Not Available | Positive | 2500173 - 2500739 | 21315.3 |
| hypothetical protein | BK658_11535 | Not Available | Positive | 2500847 - 2501065 | 7556.94 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK658_11540 | Not Available | Negative | 2501208 - 2501972 | 28216.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
