Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | BK658_11445 | Not Available | Negative | 2481528 - 2482226 | 25781.0 |
| hypothetical protein | BK658_11450 | Not Available | Negative | 2482229 - 2482696 | 17806.9 |
| rna-binding protein | BK658_11455 | Not Available | Negative | 2482764 - 2483474 | 26156.8 |
| gnat family n-acetyltransferase | BK658_11460 | Not Available | Negative | 2483557 - 2484030 | 18029.7 |
| ribosomal protein s12 methylthiotransferase | BK658_11465 | Not Available | Negative | 2484146 - 2485480 | 49508.3 |
| potassium transporter kup | BK658_11470 | Not Available | Positive | 2485803 - 2487707 | 68684.3 |
| hypothetical protein | BK658_11475 | Not Available | Negative | 2487767 - 2488093 | 11757.0 |
| virulence factor family protein | BK658_11480 | Not Available | Negative | 2488637 - 2489932 | 46832.9 |
| hypothetical protein | BK658_11485 | Not Available | Negative | 2489932 - 2492574 | 96579.5 |
| Trna-met | Not Available | Not Available | Positive | 2492853 - 2492929 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
