Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(13) synthase trud | BK658_11170 | Not Available | Positive | 2434581 - 2435639 | 38758.1 |
| 5'/3'-nucleotidase sure | BK658_11175 | Not Available | Positive | 2435627 - 2436376 | 26510.6 |
| protein-l-isoaspartate o-methyltransferase | BK658_11180 | Not Available | Positive | 2436376 - 2437053 | 25181.6 |
| hypothetical protein | BK658_11410 | Not Available | Positive | 2476557 - 2476751 | 7476.87 |
| hypothetical protein | BK658_11415 | Not Available | Negative | 2476760 - 2477185 | 15490.7 |
| dtw domain-containing protein | BK658_11420 | Not Available | Positive | 2477376 - 2478134 | 28677.4 |
| dna-binding response regulator | BK658_11425 | Not Available | Positive | 2478361 - 2479011 | 23508.4 |
| diacylglycerol kinase | BK658_11430 | Not Available | Positive | 2479087 - 2479449 | 12913.4 |
| lysr family transcriptional regulator | BK658_11435 | Not Available | Negative | 2479574 - 2480500 | 34150.0 |
| ferredoxin--nadp(+) reductase | BK658_11440 | Not Available | Positive | 2480637 - 2481416 | 29696.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
