Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | BK658_11120 | Not Available | Positive | 2423948 - 2425261 | 48317.1 |
| ctp synthase | BK658_11125 | Not Available | Positive | 2425536 - 2427167 | 59609.5 |
| 3-deoxy-8-phosphooctulonate synthase | BK658_11130 | Not Available | Positive | 2427173 - 2428018 | 30765.4 |
| phosphopyruvate hydratase | BK658_11135 | Not Available | Positive | 2428179 - 2429468 | 45536.1 |
| cell division protein ftsb | BK658_11140 | Not Available | Positive | 2429638 - 2429916 | 10543.7 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | BK658_11145 | Not Available | Positive | 2429913 - 2430620 | 25934.0 |
| lysr family transcriptional regulator | BK658_11150 | Not Available | Negative | 2431099 - 2431995 | 33915.7 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | BK658_11155 | Not Available | Positive | 2432102 - 2433214 | 39088.5 |
| s-formylglutathione hydrolase | BK658_11160 | Not Available | Positive | 2433223 - 2434068 | 31091.9 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | BK658_11165 | Not Available | Positive | 2434111 - 2434584 | 16724.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
