Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | BK658_11070 | Not Available | Positive | 2410538 - 2411890 | 48621.7 |
| outer membrane protein assembly factor bama | BK658_11075 | Not Available | Positive | 2411965 - 2414343 | 87220.6 |
| hypothetical protein | BK658_11080 | Not Available | Positive | 2414389 - 2414892 | 18889.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | BK658_11085 | Not Available | Positive | 2414896 - 2415951 | 36185.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | BK658_11090 | Not Available | Positive | 2416060 - 2416500 | 16657.6 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | BK658_11095 | Not Available | Positive | 2416497 - 2417273 | 28119.4 |
| lipid-a-disaccharide synthase | BK658_11100 | Not Available | Positive | 2417276 - 2418409 | 41079.7 |
| ribonuclease hii | BK658_11105 | Not Available | Positive | 2418421 - 2419047 | 22487.5 |
| dna polymerase iii subunit alpha | BK658_11110 | Not Available | Positive | 2419124 - 2422645 | 131479.0 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | BK658_11115 | Not Available | Positive | 2422799 - 2423746 | 34973.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
