Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK658_10920 | Not Available | Positive | 2375808 - 2376896 | 39346.9 |
| multidrug transporter acrb | BK658_10925 | Not Available | Positive | 2376903 - 2379968 | 113105.0 |
| cell filamentation protein fic | BK658_10930 | Not Available | Positive | 2380068 - 2381399 | 50380.6 |
| hypothetical protein | BK658_10935 | Not Available | Negative | 2381528 - 2381902 | 13463.0 |
| hypothetical protein | BK658_10940 | Not Available | Negative | 2382417 - 2383106 | 23728.9 |
| glycerol-3-phosphate 1-o-acyltransferase | BK658_10945 | Not Available | Negative | 2383163 - 2385667 | 94578.8 |
| cold shock domain protein cspd | BK658_10950 | Not Available | Positive | 2385913 - 2386122 | 7641.87 |
| hypothetical protein | BK658_10955 | Not Available | Negative | 2386302 - 2386679 | 14023.3 |
| sam-dependent methyltransferase | BK658_10960 | Not Available | Negative | 2386779 - 2387588 | 29850.6 |
| succinyl-diaminopimelate desuccinylase | BK658_10965 | Not Available | Negative | 2387588 - 2388739 | 41176.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
