Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | BK658_10820 | Not Available | Negative | 2355598 - 2356926 | 48806.5 |
| two-component sensor histidine kinase | BK658_10825 | Not Available | Negative | 2356923 - 2358824 | 70522.4 |
| amino acid abc transporter atp-binding protein | BK658_10830 | Not Available | Negative | 2359003 - 2359737 | 27077.1 |
| amino acid abc transporter permease | BK658_10835 | Not Available | Negative | 2359734 - 2360405 | 24490.9 |
| amino acid abc transporter permease | BK658_10840 | Not Available | Negative | 2360405 - 2361151 | 27721.3 |
| amino acid abc transporter substrate-binding protein | BK658_10845 | Not Available | Negative | 2361343 - 2362257 | 33006.8 |
| alpha/beta hydrolase | BK658_10850 | Not Available | Positive | 2362638 - 2363552 | 33237.2 |
| hypothetical protein | BK658_10855 | Not Available | Positive | 2363549 - 2363875 | 11888.5 |
| hypothetical protein | BK658_10860 | Not Available | Negative | 2363935 - 2365389 | 52148.5 |
| pilin assembly protein | BK658_10865 | Not Available | Negative | 2365558 - 2365902 | 12868.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
