Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component sensor histidine kinase | BK658_10770 | Not Available | Negative | 2345426 - 2347204 | 65786.8 |
| gnat family n-acetyltransferase | BK658_10775 | Not Available | Negative | 2347204 - 2348328 | 42364.8 |
| alpha/beta hydrolase | BK658_10780 | Not Available | Negative | 2348343 - 2349206 | 31946.7 |
| aspartate aminotransferase family protein | BK658_10785 | Not Available | Negative | 2349203 - 2350597 | 52142.4 |
| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | BK658_10790 | Not Available | Negative | 2350590 - 2351312 | 26373.9 |
| structural protein mipa | BK658_10795 | Not Available | Positive | 2351540 - 2352310 | 27239.9 |
| fatty acid desaturase | BK658_10800 | Not Available | Positive | 2352503 - 2353369 | 33294.9 |
| transporter | BK658_10805 | Not Available | Negative | 2353553 - 2353954 | 14205.7 |
| transporter | BK658_10810 | Not Available | Negative | 2353968 - 2354342 | 13453.0 |
| arginase | BK658_10815 | Not Available | Negative | 2354339 - 2355259 | 34917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
