Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing response regulator | BK658_10720 | Not Available | Negative | 2331542 - 2333413 | 69688.8 |
| two-component system response regulator | BK658_10725 | Not Available | Negative | 2333410 - 2335716 | 85723.4 |
| two-component system response regulator | BK658_10730 | Not Available | Positive | 2335979 - 2337313 | 50268.0 |
| dna mismatch repair protein mutt | BK658_10735 | Not Available | Positive | 2337498 - 2337932 | 15633.8 |
| lysine transporter lyse | BK658_10740 | Not Available | Positive | 2337961 - 2338599 | 23066.8 |
| gnat family n-acetyltransferase | BK658_10745 | Not Available | Positive | 2338605 - 2339108 | 18961.9 |
| lysr family transcriptional regulator | BK658_10750 | Not Available | Negative | 2339282 - 2340199 | 34116.5 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | BK658_10755 | Not Available | Positive | 2340309 - 2342621 | 86643.6 |
| alpha/beta hydrolase | BK658_10760 | Not Available | Positive | 2342869 - 2343903 | 37226.5 |
| sigma-54-dependent fis family transcriptional regulator | BK658_10765 | Not Available | Negative | 2344039 - 2345436 | 51429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
