Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_10520 | Not Available | Negative | 2270999 - 2273977 | 109753.0 |
| trehalose operon repressor | BK658_10525 | Not Available | Negative | 2274129 - 2274833 | 26765.8 |
| trehalose permease iic protein | BK658_10530 | Not Available | Positive | 2275056 - 2276498 | 51394.3 |
| alpha,alpha-phosphotrehalase | BK658_10535 | Not Available | Positive | 2276659 - 2278308 | 63747.9 |
| maltoporin | BK658_10540 | Not Available | Positive | 2278404 - 2279627 | 45315.8 |
| phosphoenolpyruvate--protein phosphotransferase | BK658_10545 | Not Available | Positive | 2279689 - 2282223 | 89439.9 |
| pts glucose transporter subunit iib | BK658_10550 | Not Available | Positive | 2282226 - 2282516 | 9994.32 |
| copper oxidase | BK658_10555 | Not Available | Positive | 2282763 - 2284139 | 50462.7 |
| pp_02089 | BK658_10560 | Not Available | Positive | 2284139 - 2284639 | Not Available |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | BK658_10565 | Not Available | Negative | 2284758 - 2285714 | 36141.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
