Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase der | BK658_10470 | Not Available | Positive | 2257769 - 2259238 | 54718.8 |
| aminotransferase | BK658_10475 | Not Available | Positive | 2259531 - 2260679 | 42119.4 |
| nitrilase family protein | BK658_10480 | Not Available | Positive | 2260667 - 2261458 | 29587.0 |
| 2-isopropylmalate synthase | BK658_10485 | Not Available | Negative | 2261633 - 2263312 | 61699.9 |
| peptidase m23 | BK658_10490 | Not Available | Negative | 2263791 - 2264612 | 29503.7 |
| exodeoxyribonuclease vii large subunit | BK658_10495 | Not Available | Negative | 2264616 - 2265995 | 51112.2 |
| permease | BK658_10500 | Not Available | Positive | 2266180 - 2266947 | 27462.1 |
| sugar abc transporter atpase | BK658_10505 | Not Available | Positive | 2267114 - 2267662 | 20451.6 |
| imp dehydrogenase | BK658_10510 | Not Available | Positive | 2267780 - 2269249 | 51951.8 |
| glutamine-hydrolyzing gmp synthase | BK658_10515 | Not Available | Positive | 2269349 - 2270926 | 58207.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
