Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin, 2fe-2s type, isc system | BK658_10420 | Not Available | Positive | 2249199 - 2249540 | 12375.5 |
| fe-s assembly protein iscx | BK658_10425 | Not Available | Positive | 2249555 - 2249755 | 7471.79 |
| nucleoside-diphosphate kinase | BK658_10430 | Not Available | Positive | 2249846 - 2250271 | 15038.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase | BK658_10435 | Not Available | Positive | 2250300 - 2251448 | 42311.0 |
| type iv pilus biogenesis/stability protein pilw | BK658_10440 | Not Available | Positive | 2251461 - 2252219 | 28606.1 |
| cro/cl family transcriptional regulator | BK658_10445 | Not Available | Positive | 2252219 - 2253259 | 35766.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | BK658_10450 | Not Available | Positive | 2253263 - 2254372 | 39819.2 |
| histidine--trna ligase | BK658_10455 | Not Available | Positive | 2254396 - 2255685 | 47930.4 |
| gtp-binding protein | BK658_10460 | Not Available | Positive | 2255726 - 2256367 | 22756.7 |
| outer membrane protein assembly factor bamb | BK658_10465 | Not Available | Positive | 2256360 - 2257511 | 41111.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
