Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin--[acetyl-coa-carboxylase] ligase | BK658_10370 | Not Available | Negative | 2240215 - 2241174 | 34380.8 |
| inositol monophosphatase | BK658_10375 | Not Available | Negative | 2241375 - 2242193 | 29751.5 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | BK658_10380 | Not Available | Positive | 2242339 - 2243109 | 28367.1 |
| serine o-acetyltransferase | BK658_10385 | Not Available | Positive | 2243112 - 2243888 | 27749.4 |
| fe-s cluster assembly transcriptional regulator iscr | BK658_10390 | Not Available | Positive | 2244158 - 2244649 | 17929.4 |
| iscs subfamily cysteine desulfurase | BK658_10395 | Not Available | Positive | 2244699 - 2245913 | 44658.4 |
| fe-s cluster assembly scaffold iscu | BK658_10400 | Not Available | Positive | 2246007 - 2246393 | 13871.7 |
| iron-sulfur cluster assembly protein isca | BK658_10405 | Not Available | Positive | 2246428 - 2246751 | 11498.5 |
| co-chaperone hscb | BK658_10410 | Not Available | Positive | 2246760 - 2247281 | 20226.0 |
| fe-s protein assembly chaperone hsca | BK658_10415 | Not Available | Positive | 2247333 - 2249195 | 66259.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
