Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | BK658_09710 | Not Available | Positive | 2101602 - 2102570 | 36317.9 |
| methyltransferase | BK658_09715 | Not Available | Positive | 2102573 - 2103283 | 26311.8 |
| sugar translocase | BK658_09720 | Not Available | Positive | 2103280 - 2103666 | 13855.4 |
| hypothetical protein | BK658_09725 | Not Available | Positive | 2103663 - 2105768 | 76566.3 |
| lysr family transcriptional regulator | BK658_09730 | Not Available | Positive | 2105889 - 2106833 | 34887.2 |
| hypothetical protein | BK658_09735 | Not Available | Positive | 2106912 - 2108102 | 43327.8 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | BK658_09740 | Not Available | Positive | 2108178 - 2108540 | 13241.0 |
| lysr family transcriptional regulator | BK658_09745 | Not Available | Negative | 2108559 - 2109494 | 35407.6 |
| eama family transporter | BK658_09750 | Not Available | Negative | 2109698 - 2110609 | 32525.9 |
| mfs transporter | BK658_09755 | Not Available | Negative | 2110624 - 2111808 | 42450.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
