Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase (glutamine-hydrolyzing) | BK658_09660 | Not Available | Negative | 2088527 - 2090473 | 73940.2 |
| hypothetical protein | BK658_09665 | Not Available | Negative | 2090573 - 2091355 | 28656.5 |
| hydroxymethylglutaryl-coa synthase | BK658_09670 | Not Available | Negative | 2091355 - 2092542 | 43956.2 |
| hypothetical protein | BK658_09675 | Not Available | Positive | 2093377 - 2094300 | 34318.4 |
| channel protein tolc | BK658_09680 | Not Available | Negative | 2094355 - 2095743 | 51492.1 |
| multidrug efflux protein | BK658_09685 | Not Available | Negative | 2095833 - 2098919 | 110498.0 |
| hypothetical protein | BK658_09690 | Not Available | Negative | 2098966 - 2100081 | 39571.9 |
| dsba family protein | BK658_09695 | Not Available | Negative | 2100083 - 2100742 | 24619.5 |
| hypothetical protein | BK658_09700 | Not Available | Positive | 2100741 - 2100950 | 7802.44 |
| hypothetical protein | BK658_09705 | Not Available | Positive | 2101164 - 2101355 | 7249.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
