Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2068946 - 2069035 | Not Available |
| bcr/cfla family drug resistance efflux transporter | BK658_09560 | Not Available | Negative | 2069140 - 2070384 | 45213.0 |
| gntr family transcriptional regulator | BK658_09565 | Not Available | Positive | 2070589 - 2072091 | 54137.3 |
| phd-yefm | BK658_09570 | Not Available | Positive | 2072261 - 2072551 | 10771.8 |
| plasmid stabilization protein | BK658_09575 | Not Available | Positive | 2072564 - 2072851 | 10555.7 |
| short-chain dehydrogenase | BK658_09580 | Not Available | Negative | 2072955 - 2073248 | 10633.8 |
| fis family transcriptional regulator | BK658_09585 | Not Available | Negative | 2073632 - 2073934 | 11037.2 |
| hypothetical protein | BK658_09590 | Not Available | Negative | 2073945 - 2074286 | 12778.7 |
| mfs transporter | BK658_09595 | Not Available | Negative | 2074396 - 2075814 | 49689.1 |
| marr family transcriptional regulator | BK658_09600 | Not Available | Positive | 2075934 - 2076587 | 24181.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
