Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine peptidase | BK658_09505 | Not Available | Positive | 2059485 - 2060912 | 50339.7 |
| peptidase m48 | BK658_09510 | Not Available | Negative | 2060977 - 2062410 | 53302.9 |
| response regulator sira | BK658_09515 | Not Available | Positive | 2062508 - 2062747 | 8719.42 |
| ai-2e family transporter | BK658_09520 | Not Available | Positive | 2062779 - 2063849 | 39425.4 |
| peroxiredoxin | BK658_09525 | Not Available | Negative | 2063975 - 2064448 | 17288.5 |
| glycine cleavage system protein r | BK658_09530 | Not Available | Negative | 2064459 - 2065019 | 20561.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | BK658_09535 | Not Available | Positive | 2065349 - 2066227 | 31323.1 |
| hypothetical protein | BK658_09540 | Not Available | Positive | 2066245 - 2067360 | 40699.7 |
| mbl fold metallo-hydrolase | BK658_09545 | Not Available | Positive | 2067365 - 2068123 | 27624.9 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | BK658_09550 | Not Available | Positive | 2068151 - 2068861 | 26838.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
