Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | BK658_09405 | Not Available | Negative | 2041325 - 2041531 | 7111.46 |
| hypothetical protein | BK658_09410 | Not Available | Negative | 2041762 - 2042142 | 13724.3 |
| enoyl-coa hydratase | BK658_09415 | Not Available | Negative | 2042205 - 2043317 | 41401.0 |
| uracil-dna glycosylase | BK658_09420 | Not Available | Positive | 2043449 - 2044141 | 25829.0 |
| hypothetical protein | BK658_09425 | Not Available | Negative | 2044325 - 2045362 | 37385.6 |
| tripartite tricarboxylate transporter tcta | BK658_09430 | Not Available | Negative | 2045355 - 2046869 | 52939.8 |
| hypothetical protein | BK658_09435 | Not Available | Negative | 2046871 - 2047329 | 16735.5 |
| tricarboxylic transporter | BK658_09440 | Not Available | Negative | 2047388 - 2048377 | 35298.5 |
| porin | BK658_09445 | Not Available | Negative | 2048432 - 2049724 | 46744.7 |
| dna-binding response regulator | BK658_09450 | Not Available | Positive | 2049959 - 2050630 | 24625.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
