Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine abc transporter permease poti | BK658_09305 | Not Available | Positive | 2022483 - 2023382 | 32514.7 |
| gntr family transcriptional regulator | BK658_09310 | Not Available | Negative | 2023570 - 2024958 | 51151.7 |
| benzoate transporter | BK658_09315 | Not Available | Positive | 2025332 - 2026537 | 41983.2 |
| transporter | BK658_09320 | Not Available | Negative | 2026710 - 2026925 | 7628.41 |
| oxidoreductase | BK658_09325 | Not Available | Positive | 2027131 - 2027952 | 30146.4 |
| dna polymerase ii | BK658_09330 | Not Available | Negative | 2027956 - 2030322 | 89755.3 |
| hypothetical protein | BK658_09335 | Not Available | Negative | 2030474 - 2030818 | 12563.0 |
| hypothetical protein | BK658_09340 | Not Available | Positive | 2030922 - 2031251 | 12433.7 |
| histidine kinase | BK658_09345 | Not Available | Positive | 2031465 - 2031905 | 16074.8 |
| paraquat-inducible membrane protein a | BK658_09350 | Not Available | Positive | 2032095 - 2032691 | 21892.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
