Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clavaminate synthase | BK658_09200 | Not Available | Negative | 1999860 - 2001620 | 65987.0 |
| hydrolase | BK658_09205 | Not Available | Negative | 2001650 - 2002366 | 26092.5 |
| pyoverdine biosynthesis protein pvca | BK658_09210 | Not Available | Negative | 2002366 - 2003361 | 37696.6 |
| transcriptional regulator | BK658_09215 | Not Available | Negative | 2003645 - 2004430 | 29882.9 |
| hypothetical protein | BK658_09220 | Not Available | Positive | 2004649 - 2005179 | 19880.0 |
| hypothetical protein | BK658_09225 | Not Available | Negative | 2005598 - 2005870 | 10039.7 |
| lysr family transcriptional regulator | BK658_09230 | Not Available | Positive | 2006002 - 2006943 | 34633.9 |
| hypothetical protein | BK658_09235 | Not Available | Positive | 2007154 - 2007675 | 18555.4 |
| gnat family n-acetyltransferase | BK658_09240 | Not Available | Negative | 2007773 - 2008240 | 16989.5 |
| hypothetical protein | BK658_09245 | Not Available | Positive | 2008753 - 2008992 | 8999.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
