Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_09100 | Not Available | Positive | 1984314 - 1984730 | 15353.9 |
| hypothetical protein | BK658_09105 | Not Available | Positive | 1984737 - 1985189 | 16802.9 |
| gaba permease | BK658_09110 | Not Available | Negative | 1985269 - 1986660 | 49743.0 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK658_09115 | Not Available | Positive | 1987215 - 1987988 | 28157.1 |
| amino acid abc transporter | BK658_09120 | Not Available | Positive | 1988002 - 1988757 | 27803.1 |
| abc transporter permease | BK658_09125 | Not Available | Positive | 1988836 - 1989531 | 24917.7 |
| abc transporter permease | BK658_09130 | Not Available | Positive | 1989528 - 1990217 | 25626.3 |
| sam-dependent methyltransferase | BK658_09135 | Not Available | Positive | 1990198 - 1991427 | 45768.0 |
| methyltransferase | BK658_09140 | Not Available | Positive | 1991770 - 1992591 | 31214.9 |
| serine acetyltransferase | BK658_09145 | Not Available | Positive | 1992626 - 1993153 | 19634.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
