Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | BK658_08900 | Not Available | Positive | 1946509 - 1947762 | 45790.9 |
| amino acid abc transporter substrate-binding protein | BK658_08905 | Not Available | Negative | 1947743 - 1948498 | 27930.1 |
| imidazole glycerol phosphate synthase subunit hisf | BK658_08910 | Not Available | Negative | 1948565 - 1949335 | 27257.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BK658_08915 | Not Available | Negative | 1949345 - 1950082 | 25744.1 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | BK658_08920 | Not Available | Negative | 1950125 - 1950382 | 10072.0 |
| imidazole glycerol phosphate synthase subunit hish | BK658_08925 | Not Available | Negative | 1950382 - 1951020 | 23432.9 |
| imidazoleglycerol-phosphate dehydratase | BK658_08930 | Not Available | Negative | 1951020 - 1951613 | 21972.3 |
| mfs transporter | BK658_08935 | Not Available | Negative | 1951884 - 1953545 | 58750.8 |
| gnat family n-acetyltransferase | BK658_08940 | Not Available | Positive | 1953820 - 1954218 | 14983.4 |
| cell envelope biogenesis protein asma | BK658_08945 | Not Available | Positive | 1954301 - 1956532 | 79866.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
