Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_08800 | Not Available | Negative | 1921133 - 1924723 | 128819.0 |
| glycogen phosphorylase | BK658_08805 | Not Available | Negative | 1924963 - 1927413 | 92347.1 |
| fe-s-oxidoreductase | BK658_08810 | Not Available | Positive | 1927667 - 1928104 | 16686.3 |
| gtp-binding protein typa | BK658_08815 | Not Available | Negative | 1928316 - 1930136 | 67092.5 |
| trna 4-thiouridine(8) synthase thii | BK658_08820 | Not Available | Negative | 1930276 - 1931730 | 54352.1 |
| type i glutamate--ammonia ligase | BK658_08825 | Not Available | Positive | 1932061 - 1933467 | 51681.2 |
| chorismate mutase | BK658_08830 | Not Available | Positive | 1933602 - 1934180 | 21088.2 |
| hypothetical protein | BK658_08835 | Not Available | Positive | 1934358 - 1934864 | 18324.0 |
| penicillin-binding protein | BK658_08840 | Not Available | Positive | 1934861 - 1935487 | 23236.0 |
| pas domain-containing sensor histidine kinase | BK658_08845 | Not Available | Positive | 1935741 - 1936826 | 40093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
