Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipase | BK658_08700 | Not Available | Negative | 1898754 - 1899689 | 33390.8 |
| glycine/betaine abc transporter substrate-binding protein | BK658_08705 | Not Available | Negative | 1899705 - 1900652 | 34383.5 |
| n-formylglutamate deformylase | BK658_08710 | Not Available | Negative | 1900898 - 1901701 | 29719.4 |
| imidazolonepropionase | BK658_08715 | Not Available | Negative | 1901712 - 1902917 | 43155.7 |
| proline-specific permease proy | BK658_08720 | Not Available | Negative | 1902934 - 1904340 | 50243.2 |
| histidine ammonia-lyase | BK658_08725 | Not Available | Negative | 1904447 - 1905979 | 54118.3 |
| hypothetical protein | BK658_08730 | Not Available | Negative | 1906196 - 1907020 | 30444.1 |
| abc transporter permease | BK658_08735 | Not Available | Negative | 1907017 - 1907868 | 30853.1 |
| cytosine permease | BK658_08740 | Not Available | Negative | 1908039 - 1909502 | 52149.3 |
| urocanate hydratase | BK658_08745 | Not Available | Negative | 1909667 - 1911355 | 61479.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
