Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin arginine-targeting protein translocase tatc | BK658_08650 | Not Available | Positive | 1885893 - 1886687 | 29504.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | BK658_08655 | Not Available | Positive | 1886684 - 1887391 | 26168.3 |
| methyl-accepting chemotaxis protein | BK658_08660 | Not Available | Positive | 1887635 - 1889551 | 68295.4 |
| peptide abc transporter atp-binding protein | BK658_08665 | Not Available | Negative | 1889676 - 1890410 | 26898.8 |
| abc transporter permease | BK658_08670 | Not Available | Negative | 1890403 - 1891362 | 35030.7 |
| amino acid abc transporter substrate-binding protein | BK658_08675 | Not Available | Negative | 1891501 - 1892298 | 29591.9 |
| glucan biosynthesis glucosyltransferase h | BK658_08680 | Not Available | Negative | 1892629 - 1895199 | 96537.3 |
| glucan biosynthesis protein g | BK658_08685 | Not Available | Negative | 1895192 - 1896967 | 65835.7 |
| d-tyrosyl-trna(tyr) deacylase | BK658_08690 | Not Available | Negative | 1897244 - 1897681 | 15356.7 |
| prolyl aminopeptidase | BK658_08695 | Not Available | Negative | 1897678 - 1898649 | 36451.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
