Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(3-hydroxyalkanoate) granule-associated protein phaf | BK658_08600 | Not Available | Negative | 1879456 - 1880217 | 25500.7 |
| poly(3-hydroxyalkanoate) granule-associated protein phai | BK658_08605 | Not Available | Negative | 1880228 - 1880650 | 15434.6 |
| polyhydroxyalkanoic acid system protein | BK658_08610 | Not Available | Negative | 1880899 - 1881174 | 9761.83 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | BK658_08615 | Not Available | Positive | 1881330 - 1882100 | 28417.4 |
| scp2 domain-containing protein | BK658_08620 | Not Available | Positive | 1882100 - 1882723 | 22757.3 |
| ubiquinone biosynthesis regulatory protein kinase ubib | BK658_08625 | Not Available | Positive | 1882720 - 1884324 | 61283.0 |
| phosphoribosyl-amp cyclohydrolase | BK658_08630 | Not Available | Positive | 1884406 - 1884804 | 15400.3 |
| phosphoribosyl-atp diphosphatase | BK658_08635 | Not Available | Positive | 1884797 - 1885129 | 11975.2 |
| sec-independent protein translocase tata | BK658_08640 | Not Available | Positive | 1885155 - 1885436 | 10295.5 |
| sec-independent protein translocase tatb | BK658_08645 | Not Available | Positive | 1885447 - 1885896 | 15718.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
