Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | BK658_08495 | Not Available | Negative | 1853954 - 1854472 | 19223.5 |
| fimbrial protein | BK658_08500 | Not Available | Negative | 1854477 - 1856558 | 75086.7 |
| pilus assembly protein pilp | BK658_08505 | Not Available | Negative | 1856572 - 1857099 | 19048.7 |
| pilus assembly protein pilp | BK658_08510 | Not Available | Negative | 1857096 - 1857719 | 22854.7 |
| pilus assembly protein piln | BK658_08515 | Not Available | Negative | 1857716 - 1858282 | 20898.0 |
| pilus assembly protein pilm | BK658_08520 | Not Available | Negative | 1858282 - 1859346 | 38148.0 |
| peptidase | BK658_08525 | Not Available | Positive | 1859560 - 1862001 | 88875.0 |
| hypothetical protein | BK658_08530 | Not Available | Negative | 1862074 - 1862463 | 14302.9 |
| malate dehydrogenase | BK658_08535 | Not Available | Negative | 1863535 - 1864803 | 45249.8 |
| 50s ribosomal protein l31 | BK658_08545 | Not Available | Negative | 1865801 - 1866016 | 7828.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
