Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine ammonia-lyase | BK658_08395 | Not Available | Positive | 1828076 - 1829620 | 56246.7 |
| thioesterase | BK658_08400 | Not Available | Positive | 1829613 - 1830038 | 15947.4 |
| hypothetical protein | BK658_08405 | Not Available | Positive | 1830035 - 1830634 | 22057.5 |
| hypothetical protein | BK658_08410 | Not Available | Positive | 1830618 - 1832957 | 84032.6 |
| sodium:proton antiporter | BK658_08415 | Not Available | Positive | 1832954 - 1834114 | 42140.5 |
| fad-dependent oxidoreductase | BK658_08420 | Not Available | Positive | 1834101 - 1835351 | 46031.5 |
| sam-dependent methyltransferase | BK658_08425 | Not Available | Positive | 1835348 - 1836088 | 28562.0 |
| hypothetical protein | BK658_08430 | Not Available | Positive | 1836088 - 1836573 | 18189.2 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | BK658_08435 | Not Available | Positive | 1836570 - 1837766 | 41967.9 |
| 3-hydroxylacyl-acp dehydratase | BK658_08440 | Not Available | Positive | 1837763 - 1838242 | 17326.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
