Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | BK658_08295 | Not Available | Positive | 1808045 - 1810087 | 75854.4 |
| hypothetical protein | BK658_08300 | Not Available | Positive | 1810077 - 1810817 | 27982.1 |
| type iv secretion protein rhs | BK658_08305 | Not Available | Positive | 1810814 - 1815793 | 185644.0 |
| hypothetical protein | BK658_08310 | Not Available | Positive | 1815790 - 1816260 | 18040.2 |
| hypothetical protein | BK658_08315 | Not Available | Positive | 1816951 - 1817301 | 13483.2 |
| hypothetical protein | BK658_08320 | Not Available | Positive | 1817415 - 1817690 | 10733.6 |
| hypothetical protein | BK658_08325 | Not Available | Positive | 1817877 - 1818203 | 11681.1 |
| hypothetical protein | BK658_08330 | Not Available | Positive | 1818239 - 1818511 | 9880.96 |
| xre family transcriptional regulator | BK658_08335 | Not Available | Positive | 1818847 - 1819152 | 11364.1 |
| toxin/anti-toxin system, hipa-like toxin module | BK658_08340 | Not Available | Positive | 1819152 - 1820366 | 44911.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
