Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core heptose(i) kinase rfap | BK658_08145 | Not Available | Negative | 1757869 - 1758675 | 30760.3 |
| glucosyltransferase i rfag | BK658_08150 | Not Available | Negative | 1758672 - 1759796 | 42189.8 |
| lipopolysaccharide heptosyltransferase i | BK658_08155 | Not Available | Negative | 1759796 - 1760857 | 39372.9 |
| lipopolysaccharide heptosyltransferase ii | BK658_08160 | Not Available | Negative | 1760859 - 1761893 | 38314.4 |
| bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase | BK658_08165 | Not Available | Negative | 1762150 - 1765089 | 109928.0 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | BK658_08170 | Not Available | Positive | 1765472 - 1768117 | 99494.4 |
| dihydrolipoyllysine-residue acetyltransferase | BK658_08175 | Not Available | Positive | 1768129 - 1770081 | 65887.5 |
| phosphodiesterase | BK658_08180 | Not Available | Positive | 1770417 - 1771811 | 52446.9 |
| diguanylate cyclase | BK658_08185 | Not Available | Positive | 1772046 - 1774739 | 100750.0 |
| peptide-methionine (s)-s-oxide reductase | BK658_08190 | Not Available | Positive | 1774817 - 1775464 | 23705.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
