Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv subunit b | BK658_07995 | Not Available | Negative | 1722787 - 1724691 | 69447.9 |
| esterase | BK658_08000 | Not Available | Negative | 1724734 - 1725342 | 22167.4 |
| phosphodiesterase | BK658_08005 | Not Available | Negative | 1725530 - 1726345 | 30169.0 |
| cytoplasmic protein | BK658_08010 | Not Available | Negative | 1726445 - 1726897 | 17414.3 |
| adp-ribose diphosphatase | BK658_08015 | Not Available | Negative | 1726888 - 1727505 | 23092.4 |
| duf3298 domain-containing protein | BK658_08020 | Not Available | Positive | 1727729 - 1728475 | 27350.7 |
| nitrate reductase | BK658_08025 | Not Available | Negative | 1728444 - 1729736 | 45209.6 |
| phosphomethylpyrimidine synthase thic | BK658_08030 | Not Available | Negative | 1729898 - 1731787 | 69670.1 |
| channel protein tolc | BK658_08035 | Not Available | Positive | 1732261 - 1733694 | 52290.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | BK658_08040 | Not Available | Negative | 1733825 - 1735096 | 46706.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
