Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_07685 | Not Available | Negative | 1644265 - 1644603 | 13256.5 |
| is4 family transposase | BK658_07690 | Not Available | Positive | 1645556 - 1646941 | 51865.4 |
| smi1/knr4 family protein | BK658_07695 | Not Available | Negative | 1647003 - 1647437 | 16150.9 |
| hypothetical protein | BK658_07705 | Not Available | Negative | 1652311 - 1653051 | 27995.1 |
| type iv secretion protein rhs | BK658_07710 | Not Available | Negative | 1653041 - 1655083 | 75819.3 |
| hypothetical protein | BK658_07715 | Not Available | Negative | 1655217 - 1655735 | 19100.3 |
| hypothetical protein | BK658_07720 | Not Available | Positive | 1656511 - 1657065 | 20580.5 |
| mrna interferase yafo | BK658_07725 | Not Available | Positive | 1657072 - 1657509 | 16591.8 |
| hypothetical protein | BK658_07730 | Not Available | Positive | 1657588 - 1657896 | 11310.3 |
| hypothetical protein | BK658_07735 | Not Available | Negative | 1658008 - 1659354 | 50167.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
