Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | BK658_07585 | Not Available | Positive | 1619043 - 1620002 | 33958.1 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase | BK658_07590 | Not Available | Positive | 1619999 - 1621309 | 47377.2 |
| trk system potassium transport protein trka | BK658_07595 | Not Available | Positive | 1621333 - 1622706 | 49789.0 |
| hypothetical protein | BK658_07600 | Not Available | Positive | 1622885 - 1623199 | 11527.8 |
| pilus assembly protein pilz | BK658_07605 | Not Available | Negative | 1623216 - 1623455 | 8611.52 |
| lipid a biosynthesis lauroyl acyltransferase | BK658_07610 | Not Available | Negative | 1623527 - 1624414 | 32559.9 |
| 3-methyladenine dna glycosylase | BK658_07615 | Not Available | Negative | 1624466 - 1625029 | 21399.0 |
| glycine--trna ligase subunit alpha | BK658_07620 | Not Available | Positive | 1625111 - 1626064 | 36177.9 |
| glycine--trna ligase subunit beta | BK658_07625 | Not Available | Positive | 1626061 - 1628115 | 74738.7 |
| d-glycero-beta-d-manno-heptose-1,7-bisphosphate 7-phosphatase | BK658_07630 | Not Available | Positive | 1628126 - 1628659 | 19096.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
