Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline-sulfatase | BK658_07535 | Not Available | Positive | 1608101 - 1609615 | 57087.7 |
| glycine/betaine abc transporter substrate-binding protein | BK658_07540 | Not Available | Positive | 1609631 - 1610551 | 33332.0 |
| sodium-independent anion transporter | BK658_07545 | Not Available | Positive | 1610707 - 1612275 | 56220.0 |
| shikimate dehydrogenase | BK658_07550 | Not Available | Negative | 1612441 - 1613262 | 29238.0 |
| coproporphyrinogen iii oxidase | BK658_07555 | Not Available | Negative | 1613276 - 1614190 | 34586.4 |
| quinone oxidoreductase | BK658_07560 | Not Available | Positive | 1614370 - 1615347 | 34190.1 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | BK658_07565 | Not Available | Negative | 1615481 - 1616038 | 20593.8 |
| dna protecting protein dpra | BK658_07570 | Not Available | Negative | 1616090 - 1617193 | 38776.8 |
| peptidoglycan-binding protein | BK658_07575 | Not Available | Negative | 1617274 - 1618299 | 37546.2 |
| peptide deformylase | BK658_07580 | Not Available | Positive | 1618470 - 1618976 | 19339.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
