Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine phosphatase | BK658_07435 | Not Available | Positive | 1593114 - 1593770 | 24131.1 |
| dna-binding protein | BK658_07440 | Not Available | Negative | 1593907 - 1594197 | 10545.6 |
| oligopeptidase a | BK658_07445 | Not Available | Negative | 1594194 - 1596245 | 75567.1 |
| gamma carbonic anhydrase family protein | BK658_07450 | Not Available | Positive | 1596335 - 1596880 | 19599.8 |
| had family hydrolase | BK658_07455 | Not Available | Positive | 1596908 - 1597558 | 24643.2 |
| aminopeptidase | BK658_07460 | Not Available | Negative | 1597676 - 1598752 | 40958.9 |
| hypothetical protein | BK658_07465 | Not Available | Positive | 1598812 - 1599228 | 15529.7 |
| hypothetical protein | BK658_07470 | Not Available | Positive | 1599269 - 1599688 | 15794.0 |
| hypothetical protein | BK658_07475 | Not Available | Negative | 1599695 - 1599928 | 8436.12 |
| osmc family peroxiredoxin | BK658_07480 | Not Available | Negative | 1600111 - 1600542 | 14915.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
